CDS

Accession Number TCMCG057C52150
gbkey CDS
Protein Id XP_018454219.1
Location complement(join(37402949..37403095,37403174..37403245,37403455..37403545,37403672..37403816,37409190..37409616,37409850..37410131))
Gene LOC108825427
GeneID 108825427
Organism Raphanus sativus

Protein

Length 387aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018598717.1
Definition PREDICTED: LOW QUALITY PROTEIN: la-related protein 1B [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category JO
Description La ribonucleoprotein domain family member
KEGG_TC -
KEGG_Module -
KEGG_Reaction R01252        [VIEW IN KEGG]
KEGG_rclass RC00478        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K00472        [VIEW IN KEGG]
ko:K18757        [VIEW IN KEGG]
ko:K18763        [VIEW IN KEGG]
EC 1.14.11.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00330        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
map00330        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0008143        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0022604        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034250        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045727        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0070717        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTACGACGGAGTCCAGAGGCGCTAATTCGGAATCTCAAATCCCTCCTGGCTACTCCTCTGGTGCGATCAATGATGCTTCCATTTCCTTGAAAGATCCCTTCTTCCCTCCTCCTTGTGACAACGACAAGAAGCCTGTCTGGAACAAGCCTTGTACCAGCTCCTCCCCTCCTCTTATGGGCGCCGATTCATGGCCTGCTTTGTCTCTATCTTCCCATAAGTCCCCCTCTTTGGATTCTTCCAAAGGTTTATCTGATGGATCAGCATCGTCAATGCCGCAGGCTCCTCTCAGTCTCAGCTCGAGTTCTACTGCTGCTACTTCATCTGATAACCATAATGTTAATGGCCAAAGGAAGCCTTTTAGACGAAATAACTCCACCTCATCTTCCACTAGTAACCCCCCAAATACTGATCAGAATCACACCCAAAGGAGCGGCTCTGCAACTACTCAGTCCCGTCATTCTCATAGGCATCGCAGCAACGGCAGCTCTTACCCTCCTCCTGGGGATGGGCTTCACCATGGAAACAGGCGCAACTTCGACCAGAGCTCTTTCCGTAACTCTAATGGGAGAGGAGACATGCACTTGCAACCGCCGCAAAGTGGTTTTGGGATGATGAGACCGCAGATGCTGATGGGATCACCATCTAATGCGCAATATATGACAGCGCCTCAAATAGGTTCATATGGTGGCCCCGTGATCTACCCTGAATATGATCTGCACGTCTTTTTGCCGCATCCACCTCCAGAGTCAATGACTTTAGTTGGAAACTTCCTACCTCCACCCATATATTTTCCCAGCTTTGATCCCATCTTGTACAATAAAATATTGACACAAGTAGAGTATTATTTCAGTGCTGATAACTTAAGCAAAGATAAATACTTGAGGGGTCAGATGAATGATGAAGGTTGGGTTCCTGTTAGAATTATAGCAGGGTTCAGAAGACTTGCGGAAATGACAGACAACATCCAGACTATATTGGAGGCGCTGAGAAGTTCACAAGTTGTGGAAGTTAAGGGTGAAGCAGTAAGGAGGCGAGGAGATTGGGACAAGTATTTACTGCCTCATGAACCGTCAAGCTCTGGTCCTGACGCGGCGGGAGCCTCACTGGGGGCTCAACTTGAGAGCATGACTCTATCATAGAGGAGCGGAGAGGGAGAGTAA
Protein:  
MATTESRGANSESQIPPGYSSGAINDASISLKDPFFPPPCDNDKKPVWNKPCTSSSPPLMGADSWPALSLSSHKSPSLDSSKGLSDGSASSMPQAPLSLSSSSTAATSSDNHNVNGQRKPFRRNNSTSSSTSNPPNTDQNHTQRSGSATTQSRHSHRHRSNGSSYPPPGDGLHHGNRRNFDQSSFRNSNGRGDMHLQPPQSGFGMMRPQMLMGSPSNAQYMTAPQIGSYGGPVIYPEYDLHVFLPHPPPESMTLVGNFLPPPIYFPSFDPILYNKILTQVEYYFSADNLSKDKYLRGQMNDEGWVPVRIIAGFRRLAEMTDNIQTILEALRSSQVVEVKGEAVRRRGDWDKYLLPHEPSSSGPDAAGASLGAQLESMTLSXRSGEGE